Gonzalo E. Mena bio photo

Gonzalo E. Mena

Researcher in Machine Learning and its aplications to Science.

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My Publications

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2018

  • S. Linderman*, G. Mena*, H. Cooper, J. Cunningham, L. Paninksi
    Reparameterizing the Birkhoff Polytope for Permutation Variational Inference.
    AISTATS,
    [BibTeX] [arXiv]

    @article{linderman2017reparameterizing,
    						    Author = {Linderman, Scott W. and Mena, Gonzalo E. and Cooper, Hal and Paninski, Liam and Cunningham, John P.},
    						    Journal = {arXiv preprint arXiv:1710.09508},
    						    Title = {Reparameterizing the {B}irkhoff Polytope for
    						Variational Permutation Inference},
    						    Year = {2017}}
    									}

2017

  • G. Mena L. Grosberg, S. Madugula, P. Hottowy, A. Litke, J. Cunningham, L. Paninksi and E.J. Chichilnisky
    Large-scale separation of neural spikes from electrical stimulation artifacts
    PLOS Computational Biology,
    [BibTeX] [Link] [Code]

    @article{mena2017electrical,
    title={Electrical stimulus artifact cancellation and neural spike detection on large multi-electrode arrays},
    author={Mena, Gonzalo E and Grosberg, Lauren E and Madugula, Sasidhar and Hottowy, Pawe{\l} and Litke, Alan and Cunningham, John and Chichilnisky, EJ and Paninski, Liam},
    journal={PLoS computational biology},
    volume={13},
    number={11},
    pages={e1005842},
    year={2017},
    publisher={Public Library of Science}
    }
    
  • G. Mena D. Belanger, G. Muñoz, J. Snoek,
    Sinkhorn Networks: Using Optimal Transport Techniques to Learn Permutations.
    NIPS 2017 Workshop in Optimal Transport & Machine Learning.,
    [PDF] [Poster]

  • G. Mena* S. Linderman, D. Belanger, J. Snoek, J. Cunningham, L. Paninski.
    Toward Bayesian permutation inference for identifying neurons in C. elegans.
    NIPS 2017 Workshop on Worms Neural Information Processing (WNIP),
    [PDF] [Poster]

  • S. Madugula*, G. Mena*, L. Grosberg, V. Fan, P. Hottowy, W.Dabrowski, A. Sher, A. Litke, L. Paninski, E.J. Chichilnisky
    Large-scale analysis of patterned epiretinal stimulation for prosthesis design
    The Eye and The Chip,
    [PDF]

  • G. Mena, L. Grosberg, S. Madugula, , P. Hottowy, A. Litke, J. Cunningham, L. Paninksi and E.J. Chichilnisky
    Large-scale spike sorting for the analysis of electrical stimulation and a first application
    Cosyne,
    [PDF] [Poster]

2015

  • G. Mena* and L. Grosberg*, F. Kellison-Linn, F., Chichilnisky E.J. and L. Paninski
    Large-scale Multi Electrode Array Spike Sorting Algorithm Introducing Concurrent Recording and Stimulation
    NIPS workshop on Statistical Methods for Understanding Neural Systems
    [BibTeX] [PDF] [Poster]

      @inproceedings{mena2015large,
        title={Large-scale multi electrode array spike sorting algorithm introducing concurrent recording and stimulation},
        author={Mena, Gonzalo and Grosberg, Lauren and Kellison-Linn, Frederick and Chichilnisky, E and Paninski, Liam},
        booktitle={NIPS workshop on Statistical Methods for Understanding Neural Systems},
        year={2015}
      }

2014

  • G. Mena and L. Paninski
    On quadrature methods for refractory point process likelihoods.
    Neural Computation
    [BibTeX] [Web] [Code (web)] [Code (github)]

      @article{mena2014quadrature,
        title={On quadrature methods for refractory point process likelihoods},
        author={Mena, Gonzalo and Paninski, Liam},
        journal={Neural computation},
        year={2014},
        publisher={MIT Press One Rogers St., Cambridge, MA 02142-1209 USA journals-info@ mit. edu}
      }
    

Thesis

  • B.S. thesis in mathematical engineering (spanish)
    Aportes a la teoría de ecuaciones diferenciales estocásticas reflejadas y al modelamiento de procesos neurobiológicos subyacentes a fenómenos cognitivos, 2011
    [BibTeX] [PDF]

    @article{mena2011aportes,
      title={Aportes a la teor{\'\i}a de ecuaciones diferenciales estoc{\'a}sticas reflejadas y al modelamiento de procesos neurobiol{\'o}gicos subyacentes a fen{\'o}menos cognitivos},
      author={Mena Carrasco, Gonzalo Esteban},
      year={2011},
      publisher={Universidad de Chile}
    }
    }